Construction of robust dynamic genome-scale metabolic model structures of Saccharomyces cerevisiae through iterative re-parameterization (Q44391077)

2 December 2017

Construction of robust dynamic genome-scale metabolic model structures of Saccharomyces cerevisiae through iterative re-parameterization (English)

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2 December 2017

Saccharomyces cerevisiae

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Benjamín J Sánchez

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José R Pérez-Correa

object named as

José R Pérez-Correa

series ordinal

2

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Eduardo Agosin

series ordinal

3

object named as

Eduardo Agosin

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2 December 2017

19 July 2014

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2 December 2017

Metabolic Engineering

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2 December 2017

25

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2 December 2017

159-173

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Oxygen response of the wine yeast Saccharomyces cerevisiae EC1118 grown under carbon-sufficient, nitrogen-limited enological conditions

2 December 2017

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In silico aided metabolic engineering of Saccharomyces cerevisiae for improved bioethanol production

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Saccharomyces Genome Database: the genomics resource of budding yeast

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Regulation of gene expression in flux balance models of metabolism

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Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli.

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Using flux balance analysis to guide microbial metabolic engineering.

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Glucose uptake kinetics and transcription of HXT genes in chemostat cultures of Saccharomyces cerevisiae

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Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network

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Dynamic flux balance modeling of S. cerevisiae and E. coli co-cultures for efficient consumption of glucose/xylose mixtures

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Version 6 of the consensus yeast metabolic network refines biochemical coverage and improves model performance.

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High-throughput generation, optimization and analysis of genome-scale metabolic models

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A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

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Exploring the functional landscape of gene expression: directed search of large microarray compendia

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Optimization of fed-batch Saccharomyces cerevisiae fermentation using dynamic flux balance models.

7 January 2021

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Steady-state and dynamic flux balance analysis of ethanol production by Saccharomyces cerevisiae.

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A reliable simulator for dynamic flux balance analysis

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The principle of flux minimization and its application to estimate stationary fluxes in metabolic networks.

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Dynamic flux balance analysis of the metabolism of Saccharomyces cerevisiae during the shift from fully respirative or respirofermentative metabolic states to anaerobiosis

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Metabolic-state-dependent remodeling of the transcriptome in response to anoxia and subsequent reoxygenation in Saccharomyces cerevisiae.

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Identification of parameter correlations for parameter estimation in dynamic biological models.

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Insights into the relation between mRNA and protein expression patterns: I. Theoretical considerations.

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The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism

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Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110.

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7 January 2021

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Identifiers

DOI

10.1016/J.YMBEN.2014.07.004

1 reference

2 December 2017

1 reference

PubMed ID

25046158