Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome (Q27324728)

26 June 2017

Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome (English)

1 reference

26 June 2017

7

0 references

Roland Beckmann

9

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author name string

Christian Schmidt

1

1 reference

26 June 2017

Thomas Becker

2

1 reference

26 June 2017

André Heuer

3

1 reference

26 June 2017

Katharina Braunger

4

1 reference

26 June 2017

Vivekanandan Shanmuganathan

5

1 reference

26 June 2017

Markus Pech

6

1 reference

26 June 2017

Daniel N Wilson

8

1 reference

26 June 2017

Otto Berninghausen

7

1 reference

26 June 2017

Roland Beckmann

9

1 reference

26 June 2017

language of work or name

English

0 references

publication date

28 December 2015

1 reference

26 June 2017

8

1 reference

based on heuristic

inferred from page(s)

published in

Nucleic Acids Research

1 reference

26 June 2017

44

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26 June 2017

4

1 reference

26 June 2017

1944-1951

1 reference

Creative Commons Attribution-NonCommercial 4.0 International

26 June 2017

start time

6 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Structural basis for the inhibition of the eukaryotic ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM.

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

The structure of the eukaryotic ribosome at 3.0 Å resolution

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

A paralog of lysyl-tRNA synthetase aminoacylates a conserved lysine residue in translation elongation factor P

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

PoxA, YjeK, and Elongation Factor P Coordinately Modulate Virulence and Drug Resistance in Salmonella enterica

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

PHENIX: a comprehensive Python-based system for macromolecular structure solution

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Formation of the First Peptide Bond: The Structure of EF-P Bound to the 70S Ribosome

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

TopHat: discovering splice junctions with RNA-Seq

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Crystal structure of human eIF5A1: insight into functional similarity of human eIF5A1 and eIF5A2

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Slow peptide bond formation by proline and other N-alkylamino acids in translation

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

The HHpred interactive server for protein homology detection and structure prediction

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Structure of the 70S ribosome complexed with mRNA and tRNA

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Coot: model-building tools for molecular graphics

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

UCSF Chimera--a visualization system for exploratory research and analysis

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Accurate determination of local defocus and specimen tilt in electron microscopy

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Cdc48-associated complex bound to 60S particles is required for the clearance of aberrant translation products

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Exosome-mediated recognition and degradation of mRNAs lacking a termination codon

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

The highways and byways of mRNA decay

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

RELION: implementation of a Bayesian approach to cryo-EM structure determination

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Cyclic Rhamnosylated Elongation Factor P Establishes Antibiotic Resistance in Pseudomonas aeruginosa.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Structural snapshots of actively translating human ribosomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Arginine-rhamnosylation as new strategy to activate translation elongation factor P

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

The hypusine-containing translation factor eIF5A.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Distinct XPPX sequence motifs induce ribosome stalling, which is rescued by the translation elongation factor EF-P

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

eIF5A promotes translation of polyproline motifs.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Nascent peptides that block protein synthesis in bacteria

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Structural view on recycling of archaeal and eukaryotic ribosomes after canonical termination and ribosome rescue

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Lys34 of translation elongation factor EF-P is hydroxylated by YfcM.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Termination and post-termination events in eukaryotic translation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

pH-sensitivity of the ribosomal peptidyl transfer reaction dependent on the identity of the A-site aminoacyl-tRNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Inhibition of eukaryotic translation elongation by cycloheximide and lactimidomycin

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Functional significance of eIF5A and its hypusine modification in eukaryotes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

A method of focused classification, based on the bootstrap 3D variance analysis, and its application to EF-G-dependent translocation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Translation elongation after assembly of ribosomes on the Cricket paralysis virus internal ribosomal entry site without initiation factors or initiator tRNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

An mRNA surveillance mechanism that eliminates transcripts lacking termination codons

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Genetic interactions of yeast eukaryotic translation initiation factor 5A (eIF5A) reveal connections to poly(A)-binding protein and protein kinase C signaling

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Identification of hypusine, an unusual amino acid, in a protein from human lymphocytes and of spermidine as its biosynthetic precursor

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Identification of a soluble protein that stimulates peptide bond synthesis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Eukaryotic rpL10 drives ribosomal rotation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Quantifying the local resolution of cryo-EM density maps

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Translation drives mRNA quality control

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

A single amino acid substitution in yeast eIF-5A results in mRNA stabilization

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Cleavage of spermidine as the first step in deoxyhypusine synthesis. The role of NAD.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4770232

Translation elongation factor EF-P alleviates ribosome stalling at polyproline stretches.

2 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1517

EF-P is essential for rapid synthesis of proteins containing consecutive proline residues

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1517

SIGNATURE: a single-particle selection system for molecular electron microscopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1517

Mesoporous silicon sponge as an anti-pulverization structure for high-performance lithium-ion battery anodes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1517

Modulation of the rate of peptidyl transfer on the ribosome by the nature of substrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1517

Peptidyl-prolyl-tRNA at the ribosomal P-site reacts poorly with puromycin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1517

Structural rearrangements of the ribosome at the tRNA proofreading step

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV1517

Temperature-sensitive eIF5A mutant accumulates transcripts targeted to the nonsense-mediated decay pathway

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26715760

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mutational analysis of the ribosomal protein Rpl10 from yeast

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26715760

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKV1517

1 reference

OpenCitations bibliographic resource ID

26 June 2017

723945

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference