Argonaute protein identity and pairing geometry determine cooperativity in mammalian RNA silencing. (Q35262586)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21878547%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

title

Argonaute protein identity and pairing geometry determine cooperativity in mammalian RNA silencing (English)

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11 February 2020

5

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11 February 2020

author name string

Jennifer A Broderick

1

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11 February 2020

William E Salomon

2

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11 February 2020

Sean P Ryder

3

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11 February 2020

Neil Aronin

4

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11 February 2020

language of work or name

English

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publication date

30 August 2011

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11 February 2020

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11 February 2020

volume

17

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11 February 2020

issue

10

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11 February 2020

page(s)

1858-1869

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Mammalian microRNAs predominantly act to decrease target mRNA levels

11 February 2020

cites work

1 reference

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Argonaute proteins: potential biomarkers for human colon cancer

12 July 2018

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Profiling of mismatch discrimination in RNAi enabled rational design of allele-specific siRNAs.

12 July 2018

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Small silencing RNAs: an expanding universe

12 July 2018

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Most mammalian mRNAs are conserved targets of microRNAs

12 July 2018

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Widespread changes in protein synthesis induced by microRNAs

12 July 2018

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The impact of microRNAs on protein output

12 July 2018

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Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing.

12 July 2018

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Analysis of siRNA specificity on targets with double-nucleotide mismatches

12 July 2018

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12 July 2018

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Molecular basis for target RNA recognition and cleavage by human RISC.

12 July 2018

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A Slicer-independent role for Argonaute 2 in hematopoiesis and the microRNA pathway

12 July 2018

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MicroRNA targeting specificity in mammals: determinants beyond seed pairing

12 July 2018

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P-body formation is a consequence, not the cause, of RNA-mediated gene silencing

12 July 2018

1 reference

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P bodies and the control of mRNA translation and degradation

12 July 2018

1 reference

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Slicer and the argonautes

12 July 2018

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A role for the P-body component GW182 in microRNA function

12 July 2018

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A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing

12 July 2018

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Combinatorial microRNA target predictions

12 July 2018

1 reference

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Purified Argonaute2 and an siRNA form recombinant human RISC

12 July 2018

1 reference

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A systematic analysis of the silencing effects of an active siRNA at all single-nucleotide mismatched target sites

12 July 2018

1 reference

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Principles of microRNA-target recognition

12 July 2018

1 reference

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Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs

12 July 2018

1 reference

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Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

12 July 2018

1 reference

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Argonaute2 is the catalytic engine of mammalian RNAi

12 July 2018

1 reference

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Crystal structure of Argonaute and its implications for RISC slicer activity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3185918

Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs

12 July 2018

1 reference

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Kinetic analysis of the RNAi enzyme complex

12 July 2018

1 reference

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Micromanagers of gene expression: the potentially widespread influence of metazoan microRNAs

12 July 2018

1 reference

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The RNA-induced silencing complex is a Mg2+-dependent endonuclease.

12 July 2018

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MicroRNA-directed cleavage of HOXB8 mRNA

12 July 2018

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RISC is a 5' phosphomonoester-producing RNA endonuclease

12 July 2018

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Specificity of microRNA target selection in translational repression

12 July 2018

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MicroRNAs: genomics, biogenesis, mechanism, and function

12 July 2018

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The C. elegans microRNA let-7 binds to imperfect let-7 complementary sites from the lin-41 3'UTR

12 July 2018

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Prediction of mammalian microRNA targets

12 July 2018

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Asymmetry in the assembly of the RNAi enzyme complex

12 July 2018

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siRNAs can function as miRNAs

12 July 2018

1 reference

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A microRNA in a multiple-turnover RNAi enzyme complex

12 July 2018

1 reference

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12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3185918

Both natural and designed micro RNAs can inhibit the expression of cognate mRNAs when expressed in human cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3185918

Positional effects of short interfering RNAs targeting the human coagulation trigger Tissue Factor

12 July 2018

1 reference

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Micro RNAs are complementary to 3' UTR sequence motifs that mediate negative post-transcriptional regulation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3185918

Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate

12 July 2018

1 reference

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RNA interference is mediated by 21- and 22-nucleotide RNAs

12 July 2018

1 reference

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Catalysis by Escherichia coli ribonuclease HI is facilitated by a phosphate group of the substrate.

12 July 2018

1 reference

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An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3185918

The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans

12 July 2018

1 reference

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The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation

12 July 2018

1 reference

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Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans

12 July 2018

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The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

12 July 2018

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The impact of target site accessibility on the design of effective siRNAs

12 July 2018

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Computational identification of microRNA targets.

26 September 2018

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The C elegans hunchback homolog, hbl-1, controls temporal patterning and is a probable microRNA target.

26 September 2018

1 reference

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The Caenorhabditis elegans hunchback-like gene lin-57/hbl-1 controls developmental time and is regulated by microRNAs.

26 September 2018

1 reference

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Evidence that siRNAs function as guides, not primers, in the Drosophila and human RNAi pathways.

26 September 2018

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Thermal stability of Escherichia coli ribonuclease HI and its active site mutants in the presence and absence of the Mg2+ ion. Proposal of a novel catalytic role for Glu48

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21878547

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Target accessibility dictates the potency of human RISC

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21878547

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

https://pubmed.ncbi.nlm.nih.gov/21878547

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1261/RNA.2778911

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21878547%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21878547%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

PubMed publication ID

21878547

1 reference