The social network of a cell: recent advances in interactome mapping (Q37209104)

19 August 2017

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title

The social network of a cell: recent advances in interactome mapping (English)

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social networking service

19 August 2017

main subject

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3

Anne-Claude Gavin

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Oriol Gallego

object named as

Oriol Gallego

series ordinal

2

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author name string

Sebastian Charbonnier

series ordinal

1

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19 August 2017

publication date

1 January 2008

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Biotechnology Annual Review

19 August 2017

published in

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19 August 2017

volume

14

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19 August 2017

page(s)

1-28

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19 August 2017

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Interaction domains: from simple binding events to complex cellular behavior

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Rediscovering the sweet spot in drug discovery.

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Lethality and centrality in protein networks

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Systematic discovery of new recognition peptides mediating protein interaction networks

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DILIMOT: discovery of linear motifs in proteins

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Peptides mediating interaction networks: new leads at last

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The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins

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Citric acid cycle intermediates as ligands for orphan G-protein-coupled receptors

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Apert syndrome mutations in fibroblast growth factor receptor 2 exhibit increased affinity for FGF ligand

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7 January 2021

Three novel DNMT3B mutations in Japanese patients with ICF syndrome.

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Novel mutations in the RFXANK gene: RFX complex containing in-vitro-generated RFXANK mutant binds the promoter without transactivating MHC II.

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"Fatal attractions" of proteins. A comprehensive hypothetical mechanism underlying Alzheimer's disease and other neurodegenerative disorders.

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PTEN: one gene, many syndromes

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Genomic organization of the Btk gene and exon scanning for mutations in patients with X-linked agammaglobulinemia

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Structure of the PH domain and Btk motif from Bruton's tyrosine kinase: molecular explanations for X-linked agammaglobulinaemia

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7 January 2021

The minimum information required for reporting a molecular interaction experiment (MIMIx).

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7 January 2021

Proteomic analysis of NMDA receptor-adhesion protein signaling complexes

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Synaptic multiprotein complexes associated with 5-HT(2C) receptors: a proteomic approach

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Single-step Strep-tag purification for the isolation and identification of protein complexes from mammalian cells

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Large-scale protein expression for proteome research

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Comparison of affinity tags for protein purification

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7 January 2021

Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems

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Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

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A generic protein purification method for protein complex characterization and proteome exploration

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The tandem affinity purification (TAP) method: a general procedure of protein complex purification

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Interaction network containing conserved and essential protein complexes in Escherichia coli

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7 January 2021

Functional organization of the yeast proteome by systematic analysis of protein complexes

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7 January 2021

Proteome survey reveals modularity of the yeast cell machinery

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7 January 2021

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

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Protein-protein interactions of tandem affinity purification-tagged protein kinases in rice

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A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway

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High-definition macromolecular composition of yeast RNA-processing complexes

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The study of macromolecular complexes by quantitative proteomics

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Advances in protein complex analysis using mass spectrometry

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Analysis of protein complexes using mass spectrometry

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A complex prediction: three-dimensional model of the yeast exosome.

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7 January 2021

Structure-based assembly of protein complexes in yeast

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An efficient tandem affinity purification procedure for interaction proteomics in mammalian cells

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7 January 2021

A modified tandem affinity purification strategy identifies cofactors of the Drosophila nuclear receptor dHNF4.

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The interaction bacterial and phage proteins with immobilized Escherichia coli RNA polymerase

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Phosphotyrosine interactome of the ErbB-receptor kinase family

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The biotin-capture lipid affinity assay: a rapid method for determining lipid binding parameters for apolipoproteins.

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Analysis of the cGMP/cAMP interactome using a chemical proteomics approach in mammalian heart tissue validates sphingosine kinase type 1-interacting protein as a genuine and highly abundant AKAP.

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The protein-protein interaction map of Helicobacter pylori

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A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

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A protein interaction map of Drosophila melanogaster

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Protein interaction mapping: a Drosophila case study

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A map of the interactome network of the metazoan C. elegans

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Towards a proteome-scale map of the human protein–protein interaction network

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A human protein-protein interaction network: a resource for annotating the proteome

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Isolation of an AP-1 repressor by a novel method for detecting protein-protein interactions

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The ras recruitment system, a novel approach to the study of protein-protein interactions

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Use of G-protein fusions to monitor integral membrane protein-protein interactions in yeast.

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A genetic system based on split-ubiquitin for the analysis of interactions between membrane proteins in vivo

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Design and application of a cytokine-receptor-based interaction trap

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7 January 2021

Reverse two-hybrid and one-hybrid systems to detect dissociation of protein-protein and DNA-protein interactions

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Inhibitors of Ras/Raf-1 interaction identified by two-hybrid screening revert Ras-dependent transformation phenotypes in human cancer cells.

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Reverse MAPPIT: screening for protein-protein interaction modifiers in mammalian cells.

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MASPIT: three-hybrid trap for quantitative proteome fingerprinting of small molecule-protein interactions in mammalian cells

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Filamentous phage display in the new millennium

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Random-peptide libraries and antigen-fragment libraries for epitope mapping and the development of vaccines and diagnostics

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Affinity maturation of phage display antibody populations using ribosome display

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Isolation of anti-CD22 Fv with high affinity by Fv display on human cells

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Display technologies: application for the discovery of drug and gene delivery agents

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7 January 2021

Display of a PorA peptide from Neisseria meningitidis on the bacteriophage T4 capsid surface.

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Alternative bacteriophage display systems.

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Microarrays to characterize protein interactions on a whole‐proteome scale

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Genomic analysis of regulatory network dynamics reveals large topological changes

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Evidence for dynamically organized modularity in the yeast protein-protein interaction network

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Dynamic Complex Formation During the Yeast Cell Cycle

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Imaging protein molecules using FRET and FLIM microscopy

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Apparatus for rapid and sensitive spectrophotometry

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Applications of calorimetric methods to drug discovery and the study of protein interactions

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Thermodynamics of protein-ligand interactions: history, presence, and future aspects

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7 January 2021

Investigation of the immunogenicity of a protein drug using equilibrium dialysis and liquid chromatography tandem mass spectrometry detection.

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Capturing protein-protein complexes at equilibrium: the holdup comparative chromatographic retention assay

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Protein complexes and proteome organization from yeast to man.

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Shared components of protein complexes--versatile building blocks or biochemical artefacts?

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FTY720, a novel immunosuppressive agent, induces apoptosis in human glioma cells

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In vivo activation of the p53 pathway by small-molecule antagonists of MDM2

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An inhibitor of Bcl-2 family proteins induces regression of solid tumours

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Identification and specificity studies of small-molecule ligands for SH3 protein domains

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Biologic and biochemical analyses of p16(INK4a) mutations from primary tumors

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Design and characterization of a hyperstable p16INK4a that restores Cdk4 binding activity when combined with oncogenic mutations

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7 January 2021

Structure and stability of the ankyrin domain of the Drosophila Notch receptor

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CADASIL mutations impair Notch3 glycosylation by Fringe

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SIX1 mutations cause branchio-oto-renal syndrome by disruption of EYA1-SIX1-DNA complexes

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Improving the understanding of human genetic diseases through predictions of protein structures and protein-protein interaction sites

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Functional analysis of TBX5 missense mutations associated with Holt-Oram syndrome

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The PWWP domain of Dnmt3a and Dnmt3b is required for directing DNA methylation to the major satellite repeats at pericentric heterochromatin

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7 January 2021

Microtubule-associated protein 1B: a neuronal binding partner for gigaxonin

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The interaction of the human MutL homologues in hereditary nonpolyposis colon cancer

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ABCC6/MRP6 mutations: further insight into the molecular pathology of pseudoxanthoma elasticum

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An ochre mutation in the vitamin D receptor gene causes hereditary 1,25-dihydroxyvitamin D3-resistant rickets in three families

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Dominant negative mutations in human PPARgamma associated with severe insulin resistance, diabetes mellitus and hypertension

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A transforming mutation in the pleckstrin homology domain of AKT1 in cancer

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A comprehensive two-hybrid analysis to explore the yeast protein interactome

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A proteome-wide protein interaction map for Campylobacter jejuni

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7 January 2021

Improved tandem affinity purification tag and methods for isolation of protein heterocomplexes from plants

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7 January 2021

10.1016/S1387-2656(08)00001-X

Identifiers

DOI

1 reference

19 August 2017

1 reference