Cancer transcriptome profiling at the juncture of clinical translation. (Q49566680)

21 February 2018

review article

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title

Cancer transcriptome profiling at the juncture of clinical translation. (English)

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21 February 2018

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Marcin Cieślik

1

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21 February 2018

Arul M Chinnaiyan

series ordinal

2

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21 February 2018

publication date

27 December 2017

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21 February 2018

published in

Nature Reviews Genetics

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21 February 2018

volume

19

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21 February 2018

issue

2

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21 February 2018

page(s)

93-109

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21 February 2018

https://scigraph.springernature.com/pub.10.1038/nrg.2017.96

exact match

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cites work

Characterization of the yeast transcriptome

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The transcriptional landscape of the mammalian genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

RNA modifications: what have we learned and where are we headed?

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Experimental annotation of the human genome using microarray technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Functional discovery via a compendium of expression profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Translating RNA sequencing into clinical diagnostics: opportunities and challenges.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Chemosensitivity prediction by transcriptional profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The clonal evolution of tumor cell populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Disease signatures are robust across tissues and experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Colliding dynamical complex network models: biological attractors versus attractors from material physics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A community effort to assess and improve drug sensitivity prediction algorithms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The current excitement in bioinformatics-analysis of whole-genome expression data: how does it relate to protein structure and function?

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Chimeric transcript discovery by paired-end transcriptome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Ten years of next-generation sequencing technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

RNA maps reveal new RNA classes and a possible function for pervasive transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Elucidation of the small RNA component of the transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Formation and detection of RNA-DNA hybrid molecules in cytological preparations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

DNA sequencing with chain-terminating inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Method for detection of specific RNAs in agarose gels by transfer to diazobenzyloxymethyl-paper and hybridization with DNA probes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Nucleotide sequence of a cDNA clone encoding human preproinsulin

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Nucleotide sequence of cloned cDNA for bovine corticotropin-β-lipotropin precursor

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Isolation, cloning and sequence analysis of the cDNA for the α-subunit of human chorionic gonadotropin

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Large scale cDNA sequencing for analysis of quantitative and qualitative aspects of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A novel method for real time quantitative RT-PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Real time quantitative PCR

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Kinetic PCR Analysis: Real-time Monitoring of DNA Amplification Reactions

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Quantitative monitoring of gene expression patterns with a complementary DNA microarray

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Expression monitoring by hybridization to high-density oligonucleotide arrays

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Common 82-nucleotide sequence unique to brain RNA

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Serial analysis of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A combination of LongSAGE with Solexa sequencing is well suited to explore the depth and the complexity of transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Massively parallel digital transcriptional profiling of single cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

High-efficiency full-length cDNA cloning by biotinylated CAP trapper

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Shotgun sequencing of the human transcriptome with ORF expressed sequence tags

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Identification of human chromosome 22 transcribed sequences with ORF expressed sequence tags

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The Sequence of the Human Genome

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach.

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

DeepSAGE--digital transcriptomics with high sensitivity, simple experimental protocol and multiplexing of samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The transcriptional landscape of the yeast genome defined by RNA sequencing

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Counting absolute numbers of molecules using unique molecular identifiers

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

CEL-Seq: single-cell RNA-Seq by multiplexed linear amplification

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The use of exome capture RNA-seq for highly degraded RNA with application to clinical cancer sequencing

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

cDNA hybrid capture improves transcriptome analysis on low-input and archived samples

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Targeted sequencing for gene discovery and quantification using RNA CaptureSeq.

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Unusual features in the nucleotide sequence of a cDNA clone derived from the common region of avian sarcoma virus messenger RNA

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1 reference

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Gene expression profiles in normal and cancer cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Use of a cDNA microarray to analyse gene expression patterns in human cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

An integrated encyclopedia of DNA elements in the human genome

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A comprehensive transcriptional portrait of human cancer cell lines

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The Genotype-Tissue Expression (GTEx) project

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Proteomics. Tissue-based map of the human proteome

21 January 2018

2 references

https://api.crossref.org/works/10.1038%2FNRG.2017.96

21 January 2018

https://api.crossref.org/works/10.1038%2FNRG.2017.96

7 January 2021

inferred from DOI database lookup

The Cancer Genome Atlas Pan-Cancer analysis project

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Integrative clinical genomics of advanced prostate cancer

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https://api.crossref.org/works/10.1038%2FNRG.2017.96

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The EMBL data library

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https://api.crossref.org/works/10.1038%2FNRG.2017.96

dbEST--database for "expressed sequence tags"

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Identification of common molecular subsequences

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The human genome browser at UCSC

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1 reference

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Improved tools for biological sequence comparison

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https://api.crossref.org/works/10.1038%2FNRG.2017.96

Basic local alignment search tool

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The Ensembl genome database project

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1 reference

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NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

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The landscape of long noncoding RNAs in the human transcriptome

21 January 2018

1 reference

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Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

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1 reference

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ArrayExpress--a public repository for microarray gene expression data at the EBI

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1 reference

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Integrative molecular concept modeling of prostate cancer progression.

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InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor

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Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace

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The causes and consequences of genetic heterogeneity in cancer evolution

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Loss of E-cadherin promotes metastasis via multiple downstream transcriptional pathways

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Genomic correlates of response to CTLA-4 blockade in metastatic melanoma

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A 71-gene signature of TRAIL sensitivity in cancer cells.

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The proliferation gene expression signature is a quantitative integrator of oncogenic events that predicts survival in mantle cell lymphoma

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A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers.

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A molecular signature of metastasis in primary solid tumors

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Oncogenic pathway signatures in human cancers as a guide to targeted therapies

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Systematic variation in gene expression patterns in human cancer cell lines

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Detecting differential usage of exons from RNA-seq data

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Genome-wide analysis of alternative promoters of human genes using a custom promoter tiling array

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Deep RNA sequencing analysis of readthrough gene fusions in human prostate adenocarcinoma and reference samples

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Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

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The functional consequences of alternative promoter use in mammalian genomes

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Alternative transcription initiation leads to expression of a novel ALK isoform in cancer

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RNA regulons: coordination of post-transcriptional events

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Accurate identification of A-to-I RNA editing in human by transcriptome sequencing

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Transcriptome-wide mapping of N(6)-methyladenosine by m(6)A-seq based on immunocapturing and massively parallel sequencing.

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A review of methods for detect human Papillomavirus infection

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ViralFusionSeq: accurately discover viral integration events and reconstruct fusion transcripts at single-base resolution

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1 reference

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Reliable identification of genomic variants from RNA-seq data

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Single-cell mRNA sequencing identifies subclonal heterogeneity in anti-cancer drug responses of lung adenocarcinoma cells

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Multivariate models from RNA-Seq SNVs yield candidate molecular targets for biomarker discovery: SNV-DA

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Practicability of detecting somatic point mutation from RNA high throughput sequencing data

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Calling genotypes from public RNA-sequencing data enables identification of genetic variants that affect gene-expression levels

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Integrated RNA and DNA sequencing improves mutation detection in low purity tumors.

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Transcriptome sequencing to detect gene fusions in cancer

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COPA--cancer outlier profile analysis.

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Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer.

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Detection and analysis of spliced chimeric mRNAs in sequence databanks

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A single oncogenic enhancer rearrangement causes concomitant EVI1 and GATA2 deregulation in leukemia

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Gene fusions associated with recurrent amplicons represent a class of passenger aberrations in breast cancer

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Effects of sequence variation on differential allelic transcription factor occupancy and gene expression

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Biases in small RNA deep sequencing data

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A promoter-level mammalian expression atlas

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Sequencing degraded RNA addressed by 3' tag counting.

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Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

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Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts

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Selective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage.

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Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

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A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells

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HDAC inhibitors induce transcriptional repression of high copy number genes in breast cancer through elongation blockade

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Genome-wide measurement of RNA secondary structure in yeast

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1 reference

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Structural imprints in vivo decode RNA regulatory mechanisms

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1 reference

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rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome.

21 January 2018

1 reference

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Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions

21 January 2018

1 reference

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Genome-wide identification of polycomb-associated RNAs by RIP-seq

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

RNA-RNA interactions enable specific targeting of noncoding RNAs to nascent Pre-mRNAs and chromatin sites

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

RNA as a drug target: chemical, modelling, and evolutionary tools

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Genome-wide quantitative enhancer activity maps identified by STARR-seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

UNDO: a Bioconductor R package for unsupervised deconvolution of mixed gene expressions in tumor samples.

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Detecting and correcting systematic variation in large-scale RNA sequencing data

21 January 2018

1 reference

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svaseq: removing batch effects and other unwanted noise from sequencing data

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1 reference

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voom: Precision weights unlock linear model analysis tools for RNA-seq read counts

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1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Profiling of estrogen up- and down-regulated gene expression in human breast cancer cells: insights into gene networks and pathways underlying estrogenic control of proliferation and cell phenotype

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Ballgown bridges the gap between transcriptome assembly and expression analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Coexpression analysis of human genes across many microarray data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A general modular framework for gene set enrichment analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Methods and approaches in the topology-based analysis of biological pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Dysregulated gene expression networks in human acute myelogenous leukemia stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

From 'differential expression' to 'differential networking' - identification of dysfunctional regulatory networks in diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Elucidating Compound Mechanism of Action by Network Perturbation Analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The Molecular Signatures Database (MSigDB) hallmark gene set collection

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

ONCOMINE: a cancer microarray database and integrated data-mining platform

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Gene Perturbation Atlas (GPA): a single-gene perturbation repository for characterizing functional mechanisms of coding and non-coding genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

InnateDB: facilitating systems-level analyses of the mammalian innate immune response.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Poor prognosis in carcinoma is associated with a gene expression signature of aberrant PTEN tumor suppressor pathway activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

GSVA: gene set variation analysis for microarray and RNA-seq data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Delineation of two clinically and molecularly distinct subgroups of posterior fossa ependymoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Lowered H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Targetable kinase-activating lesions in Ph-like acute lymphoblastic leukemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Gene expression profiling predicts clinical outcome of breast cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Supervised risk predictor of breast cancer based on intrinsic subtypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Cluster analysis and display of genome-wide expression patterns

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

ISOpureR: an R implementation of a computational purification algorithm of mixed tumour profiles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Inferring tumour purity and stromal and immune cell admixture from expression data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Comprehensive Molecular Portraits of Invasive Lobular Breast Cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Transcriptome analysis of individual stromal cell populations identifies stroma-tumor crosstalk in mouse lung cancer model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Single-cell transcriptomics uncovers distinct molecular signatures of stem cells in chronic myeloid leukemia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Genomic and transcriptional aberrations linked to breast cancer pathophysiologies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Identification of osteosarcoma driver genes by integrative analysis of copy number and gene expression data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Integrated molecular profiles of invasive breast tumors and ductal carcinoma in situ (DCIS) reveal differential vascular and interleukin signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

DNase I sensitivity QTLs are a major determinant of human expression variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Genome-wide association analysis of more than 120,000 individuals identifies 15 new susceptibility loci for breast cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Multiple independent variants at the TERT locus are associated with telomere length and risks of breast and ovarian cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Correlation of somatic mutation and expression identifies genes important in human glioblastoma progression and survival

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Principles and methods of integrative genomic analyses in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Multiclass cancer diagnosis using tumor gene expression signatures

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Identification of Cancer Related Genes Using a Comprehensive Map of Human Gene Expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A pan-cancer analysis of prognostic genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The landscape and therapeutic relevance of cancer-associated transcript fusions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3'-UTR landscape across seven tumour types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Gene expression analysis identifies global gene dosage sensitivity in cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Integrative Clinical Sequencing in the Management of Refractory or Relapsed Cancer in Youth

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Implementation of next generation sequencing into pediatric hematology-oncology practice: moving beyond actionable alterations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Integrative clinical genomics of metastatic cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Memorial Sloan Kettering-Integrated Mutation Profiling of Actionable Cancer Targets (MSK-IMPACT): A Hybridization Capture-Based Next-Generation Sequencing Clinical Assay for Solid Tumor Molecular Oncology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Identification and Validation of PCAT14 as Prognostic Biomarker in Prostate Cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Analyzing Somatic Genome Rearrangements in Human Cancers by Using Whole-Exome Sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Value of mismatch repair, KRAS, and BRAF mutations in predicting recurrence and benefits from chemotherapy in colorectal cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Predictive biomarkers in PD-1/PD-L1 checkpoint blockade immunotherapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Single-cell genome sequencing: current state of the science

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Discovery and saturation analysis of cancer genes across 21 tumour types

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

70-Gene Signature as an Aid to Treatment Decisions in Early-Stage Breast Cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

RNA-Seq accurately identifies cancer biomarker signatures to distinguish tissue of origin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

mRIN for direct assessment of genome-wide and gene-specific mRNA integrity from large-scale RNA-sequencing data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Organocatalytic removal of formaldehyde adducts from RNA and DNA bases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Circular RNA enrichment in platelets is a signature of transcriptome degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Characterization of human plasma-derived exosomal RNAs by deep sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Quantitative assessment of single-cell RNA-sequencing methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Somatic mutations lead to an oncogenic deletion of met in lung cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Biallelic Alteration and Dysregulation of the Hippo Pathway in Mucinous Tubular and Spindle Cell Carcinoma of the Kidney

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

NY-ESO-1 is highly expressed in poor-prognosis multiple myeloma and induces spontaneous humoral and cellular immune responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Biomarkers in cancer staging, prognosis and treatment selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Strategies for discovering novel cancer biomarkers through utilization of emerging technologies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Mechanism-driven biomarkers to guide immune checkpoint blockade in cancer therapy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Widespread parainflammation in human cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The prognostic landscape of genes and infiltrating immune cells across human cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Pan-cancer Immunogenomic Analyses Reveal Genotype-Immunophenotype Relationships and Predictors of Response to Checkpoint Blockade.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Analysis of Immune Signatures in Longitudinal Tumor Samples Yields Insight into Biomarkers of Response and Mechanisms of Resistance to Immune Checkpoint Blockade

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Integrated molecular analysis of tumor biopsies on sequential CTLA-4 and PD-1 blockade reveals markers of response and resistance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Robust detection of immune transcripts in FFPE samples using targeted RNA sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

An immunogenic personal neoantigen vaccine for patients with melanoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Cancer immunotherapy. A dendritic cell vaccine increases the breadth and diversity of melanoma neoantigen-specific T cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

DeconRNASeq: a statistical framework for deconvolution of heterogeneous tissue samples based on mRNA-Seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Robust enumeration of cell subsets from tissue expression profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

MiXCR: software for comprehensive adaptive immunity profiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Assembly-based inference of B-cell receptor repertoires from short read RNA sequencing data with V'DJer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Transfer of clinically relevant gene expression signatures in breast cancer: from Affymetrix microarray to Illumina RNA-Sequencing technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Comparison of RNA-seq and microarray-based models for clinical endpoint prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

How many biological replicates are needed in an RNA-seq experiment and which differential expression tool should you use?

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

AceView: a comprehensive cDNA-supported gene and transcripts annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Data management and analysis for gene expression arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

An atlas of human long non-coding RNAs with accurate 5' ends.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The GENCODE human gene set

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

GSEA-P: a desktop application for Gene Set Enrichment Analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

RNAscope: a novel in situ RNA analysis platform for formalin-fixed, paraffin-embedded tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

SAGEmap: a public gene expression resource

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Significance analysis of microarrays applied to the ionizing radiation response

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

STAR: ultrafast universal RNA-seq aligner

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

TACO produces robust multisample transcriptome assemblies from RNA-seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

De novo assembly and analysis of RNA-seq data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Full-length transcriptome assembly from RNA-Seq data without a reference genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

QoRTs: a comprehensive toolset for quality control and data processing of RNA-Seq experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Near-optimal probabilistic RNA-seq quantification

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

TopHat-Fusion: an algorithm for discovery of novel fusion transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Toward a Shared Vision for Cancer Genomic Data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

A new class of Solvent-in-Salt electrolyte for high-energy rechargeable metallic lithium batteries

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Use of a fluorescent-PCR reaction to detect genomic sequence copy number and transcriptional abundance

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Ratio-based decisions and the quantitative analysis of cDNA microarray images

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Statistical Issues in cDNA Microarray Data Analysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Integrated exome and transcriptome sequencing reveals ZAK isoform usage in gastric cancer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Computational pipeline for the PGV-001 neoantigen vaccine trial

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Wide diversity of PAX5 alterations in B-ALL: a Groupe Francophone de Cytogenetique Hematologique study

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Indel detection from RNA-seq data: tool evaluation and strategies for accurate detection of actionable mutations.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Impact of therapy on genomics and transcriptomics in high-risk prostate cancer treated with neoadjuvant docetaxel and androgen deprivation therapy.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Classification, subtype discovery, and prediction of outcome in pediatric acute lymphoblastic leukemia by gene expression profiling

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The landscape of viral expression and host gene fusion and adaptation in human cancer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Stabilization of cell-free RNA in blood samples using a new collection device

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

Fusion genes and rearranged genes as a linear function of chromosome aberrations in cancer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2017.96

The GenBank nucleic acid sequence database

31 March 2020

1 reference

12 December 2020

Inactivation of the P16INK4/MTS1 gene by a chromosome translocation t(9;14)(p21-22;q11) in an acute lymphoblastic leukemia of B-cell type

1 reference

12 December 2020

A public database for gene expression in human cancers

1 reference

12 December 2020

Telomerase RNA as a detection marker in the serum of breast cancer patients

1 reference

12 December 2020

The Catalogue of Somatic Mutations in Cancer (COSMIC)

1 reference

12 December 2020

Predictive gene signature in MAGE-A3 antigen-specific cancer immunotherapy.

1 reference

12 December 2020

SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence

1 reference

12 December 2020

INTEGRATE-neo: a pipeline for personalized gene fusion neoantigen discovery

1 reference

12 December 2020

Computational Pipeline for the PGV-001 Neoantigen Vaccine Trial.

1 reference

12 December 2020

Identifiers

DOI

10.1038/NRG.2017.96

1 reference

21 February 2018

Dimensions Publication ID

0 references

1 reference

21 February 2018