Tracing the temporal-spatial transcriptome landscapes of the human fetal digestive tract using single-cell RNA-sequencing (Q88867807)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

title

Tracing the temporal-spatial transcriptome landscapes of the human fetal digestive tract using single-cell RNA-sequencing (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

1 reference

corrigendum / erratum

Publisher Correction: Tracing the temporal-spatial transcriptome landscapes of the human fetal digestive tract using single-cell RNA-sequencing

0 references

author

Liying Yan

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Xinglong Wu

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Hao Ge

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Jie Qiao

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Fuchou Tang

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

author name string

Shuai Gao

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Rui Wang

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Jingyun Li

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Jun Yong

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Xin Zhou

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Yuan Wei

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Xiaoye Wang

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Xiaoying Fan

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Jie Yan

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Xu Zhi

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Yun Gao

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Hongshan Guo

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Xiao Jin

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Wendong Wang

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Yunuo Mao

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Fengchao Wang

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Lu Wen

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

Wei Fu

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

publication date

25 May 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

volume

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

page(s)

721-734

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

Vertebrate endoderm development and organ formation

28 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Patterning and shaping the endoderm in vivo and in culture

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Transcriptional dynamics of endodermal organ formation

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Solute and Water Absorption by the Human Small Intestine

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

High-fat-diet-mediated dysbiosis promotes intestinal carcinogenesis independently of obesity

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Influence of the surface of the small intestine on enzymatic hydrolysis of starch by enzymes

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Reciprocal interactions of the intestinal microbiota and immune system.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Immunoglobulin A coating identifies colitogenic bacteria in inflammatory bowel disease

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Anatomic Adaptation of the Alimentary Tract of the Rat to the Hyperphagia of Chronic Alloxan-Diabetes

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Signatures of mutational processes in human cancer

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Review of atrophic gastritis and intestinal metaplasia as a premalignant lesion of gastric cancer

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

CEL-Seq: single-cell RNA-Seq by multiplexed linear amplification

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Full-length RNA-seq from single cells using Smart-seq2.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

RNA-Seq analysis to capture the transcriptome landscape of a single cell

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Single-cell RNA-seq transcriptome analysis of linear and circular RNAs in mouse preimplantation embryos.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Power analysis of single-cell RNA-sequencing experiments

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Comparative Analysis of Single-Cell RNA Sequencing Methods.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Spatial reconstruction of single-cell gene expression data

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Single-cell messenger RNA sequencing reveals rare intestinal cell types

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Single-cell mRNA quantification and differential analysis with Census

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and Hair Follicle Heterogeneity

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

The use of murine-derived fundic organoids in studies of gastric physiology.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

A single-cell survey of the small intestinal epithelium

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Single-Cell Landscape of Transcriptional Heterogeneity and Cell Fate Decisions during Mouse Early Gastrulation

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Intestinal development and differentiation.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Generation of organized anterior foregut epithelia from pluripotent stem cells using small molecules

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Isolation of the Pax9 cDNA from adult human esophagus

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

TFF2 mRNA transcript expression marks a gland progenitor cell of the gastric oxyntic mucosa.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Generation of stomach tissue from mouse embryonic stem cells

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Somatic stem cell heterogeneity: diversity in the blood, skin and intestinal stem cell compartments

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Adult intestinal stem cells: critical drivers of epithelial homeostasis and regeneration

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Molecular aspects of esophageal development.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Conversion of columnar to stratified squamous epithelium in the developing mouse oesophagus.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Differential expression of ANXA1 in benign human gastrointestinal tissues and cancers

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Annexin A1 is involved in resistance to 5-FU in colon cancer cells

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Stomach development, stem cells and disease

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Modelling human development and disease in pluripotent stem-cell-derived gastric organoids

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

In vitro expansion of human gastric epithelial stem cells and their responses to bacterial infection

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Identification of multipotent mammary stem cells by protein C receptor expression.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Peyer's patch M cells derived from Lgr5(+) stem cells require SpiB and are induced by RankL in cultured "miniguts".

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

The ErbB3 receptor tyrosine kinase negatively regulates Paneth cells by PI3K-dependent suppression of Atoh1.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Homeobox genes in gut development

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Hedgehog signalling in gut development, physiology and cancer

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

New insights into the role of Hedgehog signaling in gastrointestinal development and cancer.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Sonic hedgehog is essential to foregut development

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Essential function of Gli2 and Gli3 in the formation of lung, trachea and oesophagus

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Indian Hedgehog is an antagonist of Wnt signaling in colonic epithelial cell differentiation

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Hedgehog signaling in development and homeostasis of the gastrointestinal tract

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Single-Cell RNA-Seq Analysis Maps Development of Human Germline Cells and Gonadal Niche Interactions.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Mad upregulation and Id2 repression accompany transforming growth factor (TGF)-beta-mediated epithelial cell growth suppression.

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Bone Morphogenetic Protein (BMP) signaling in development and human diseases

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

BMP restricts stemness of intestinal Lgr5+ stem cells by directly suppressing their signature genes

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

TopHat: discovering splice junctions with RNA-Seq

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

HTSeq--a Python framework to work with high-throughput sequencing data

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Statistical significance of variables driving systematic variation in high-dimensional data

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

APCluster: an R package for affinity propagation clustering

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Clustering by passing messages between data points

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

Computational assignment of cell-cycle stage from single-cell transcriptome data

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

AnimalTFDB 2.0: a resource for expression, prediction and functional study of animal transcription factors

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

AnimalTFDB: a comprehensive animal transcription factor database

1 reference

https://api.crossref.org/works/10.1038%2FS41556-018-0105-4

7 January 2021

10.1038/S41556-018-0105-4

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29802404%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

1 reference