Metabolomics and diabetes: analytical and computational approaches (Q28084835)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

author name string

Alla Karnovsky

series ordinal

2

2 references

Crossref

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

George Michailidis

series ordinal

3

2 references

Crossref

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Subramaniam Pennathur

series ordinal

4

2 references

Crossref

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

language of work or name

1 reference

March 2015

1 reference

1 March 2015

3 references

14 March 2019

24 March 2019

31 October 2020

5 references

14 March 2019

24 March 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

31 October 2020

64

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

issue

3

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

page(s)

718-732

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

2-Aminoadipic acid is a biomarker for diabetes risk

4 June 2020

cites work

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20 March 2017

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Long-chain acyl-CoA synthetase 4 modulates prostaglandin E₂ release from human arterial smooth muscle cells

20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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20 March 2017

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Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum

20 March 2017

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20 March 2017

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Global reconstruction of the human metabolic network based on genomic and bibliomic data

20 March 2017

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20 March 2017

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From genomics to chemical genomics: new developments in KEGG

20 March 2017

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Computational prediction of human metabolic pathways from the complete human genome

20 March 2017

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20 March 2017

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Reduction in the Incidence of Type 2 Diabetes with Lifestyle Intervention or Metformin

20 March 2017

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Prevention of type 2 diabetes mellitus by changes in lifestyle among subjects with impaired glucose tolerance

20 March 2017

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Genome-wide association study identifies multiple loci influencing human serum metabolite levels

20 March 2017

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20 March 2017

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Systemic perturbations of key metabolites in diabetic rats during the evolution of diabetes studied by urine metabonomics

20 March 2017

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Plasma metabolomic profiles reflective of glucose homeostasis in non-diabetic and type 2 diabetic obese African-American women

20 March 2017

1 reference

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COH-SR4 reduces body weight, improves glycemic control and prevents hepatic steatosis in high fat diet-induced obese mice

20 March 2017

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Biomarkers for type 2 diabetes and impaired fasting glucose using a nontargeted metabolomics approach

20 March 2017

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Multi-dimensional mass spectrometry-based shotgun lipidomics and novel strategies for lipidomic analyses

20 March 2017

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Metabolic footprint of diabetes: a multiplatform metabolomics study in an epidemiological setting

20 March 2017

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PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

20 March 2017

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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The complex role of branched chain amino acids in diabetes and cancer

29 September 2017

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Testing the role of myeloid cell glucose flux in inflammation and atherosclerosis

29 September 2017

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MetDisease--connecting metabolites to diseases via literature

29 September 2017

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Uremic solutes and risk of end-stage renal disease in type 2 diabetes: metabolomic study

29 September 2017

1 reference

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X13CMS: global tracking of isotopic labels in untargeted metabolomics

29 September 2017

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The complete targeted profile of the organic acid intermediates of the citric acid cycle using a single stable isotope dilution analysis, sodium borodeuteride reduction and selected ion monitoring GC/MS.

29 September 2017

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Mass spectrometric quantification of L-arginine and its pathway related substances in biofluids: the road to maturity

29 September 2017

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AMPK dysregulation promotes diabetes-related reduction of superoxide and mitochondrial function

29 September 2017

1 reference

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Methods and approaches in the topology-based analysis of biological pathways

29 September 2017

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Metabolomics reveals signature of mitochondrial dysfunction in diabetic kidney disease

29 September 2017

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29 September 2017

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Predicting network activity from high throughput metabolomics

29 September 2017

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Alteration of bile acid metabolism in the rat induced by chronic ethanol consumption

29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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NMR and pattern recognition methods in metabolomics: from data acquisition to biomarker discovery: a review

29 September 2017

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The importance of experimental design and QC samples in large-scale and MS-driven untargeted metabolomic studies of humans

29 September 2017

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Identification of serum metabolites associated with risk of type 2 diabetes using a targeted metabolomic approach

29 September 2017

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Novel biomarkers for pre-diabetes identified by metabolomics

29 September 2017

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Rational design of ¹³C-labeling experiments for metabolic flux analysis in mammalian cells

29 September 2017

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29 September 2017

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Genome-wide association studies with metabolomics

29 September 2017

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A comprehensive method for extraction and quantitative analysis of sterols and secosteroids from human plasma.

29 September 2017

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Metab2MeSH: annotating compounds with medical subject headings

29 September 2017

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Changing metabolic signatures of amino acids and lipids during the prediabetic period in a pig model with impaired incretin function and reduced β-cell mass

29 September 2017

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Concordance of changes in metabolic pathways based on plasma metabolomics and skeletal muscle transcriptomics in type 1 diabetes

29 September 2017

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Diabetes promotes an inflammatory macrophage phenotype and atherosclerosis through acyl-CoA synthetase 1.

29 September 2017

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NADPH oxidase-derived reactive oxygen species increases expression of monocyte chemotactic factor genes in cultured adipocytes

29 September 2017

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Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data.

29 September 2017

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Metabolomics in drug target discovery

29 September 2017

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Metabolomic profiling reveals potential markers and bioprocesses altered in bladder cancer progression

29 September 2017

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Analysis of Diacylglycerol Molecular Species in Cellular Lipid Extracts by Normal-Phase LC-Electrospray Mass Spectrometry

29 September 2017

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High sensitivity quantitative lipidomics analysis of fatty acids in biological samples by gas chromatography-mass spectrometry

29 September 2017

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Metabolomic data processing, analysis, and interpretation using MetaboAnalyst

29 September 2017

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A genome-wide association study of metabolic traits in human urine

29 September 2017

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Reducing time and increasing sensitivity in sample preparation for adherent mammalian cell metabolomics

29 September 2017

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Lipid profiling identifies a triacylglycerol signature of insulin resistance and improves diabetes prediction in humans

29 September 2017

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Quantitative analysis of amino Acid oxidation markers by tandem mass spectrometry

29 September 2017

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Stable isotope-resolved metabolomics (SIRM) in cancer research with clinical application to nonsmall cell lung cancer

29 September 2017

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Remote communication through solute carriers and ATP binding cassette drug transporter pathways: an update on the remote sensing and signaling hypothesis

29 September 2017

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MBRole: enrichment analysis of metabolomic data

29 September 2017

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Nuclear magnetic resonance (NMR)-based metabolomics

29 September 2017

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Paintomics: a web based tool for the joint visualization of transcriptomics and metabolomics data

29 September 2017

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Quiescent fibroblasts exhibit high metabolic activity.

29 September 2017

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A detailed genome-wide reconstruction of mouse metabolism based on human Recon 1.

29 September 2017

1 reference

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Endoplasmic Reticulum Stress and Inflammation in Obesity and Diabetes

29 September 2017

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Compartmentalization of the Edinburgh Human Metabolic Network

29 September 2017

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MetPA: a web-based metabolomics tool for pathway analysis and visualization

29 September 2017

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Drug-induced liver injury: past, present and future.

29 September 2017

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NAD+ metabolite levels as a function of vitamins and calorie restriction: evidence for different mechanisms of longevity

29 September 2017

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Integration of -omics data and networks for biomedical research with VANTED.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Use of multiple metabolic and genetic markers to improve the prediction of type 2 diabetes: the EPIC-Potsdam Study

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Serum indoxyl sulfate is associated with vascular disease and mortality in chronic kidney disease patients

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Altered regulation of metabolic pathways in human lung cancer discerned by (13)C stable isotope-resolved metabolomics (SIRM)

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Toward a systems level understanding of organic anion and other multispecific drug transporters: a remote sensing and signaling hypothesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Validating, augmenting and refining genome-wide association signals

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

High heritability of metabolomic profiles in families burdened with premature cardiovascular disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Rosiglitazone reduces renal and plasma markers of oxidative injury and reverses urinary metabolite abnormalities in the amelioration of diabetic nephropathy.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Triacylglycerol fatty acid composition in diet-induced weight loss in subjects with abnormal glucose metabolism--the GENOBIN study

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Genetic networks of liver metabolism revealed by integration of metabolic and transcriptional profiling

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Structure-specific, quantitative methods for analysis of sphingolipids by liquid chromatography-tandem mass spectrometry: "inside-out" sphingolipidomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Glycerophospholipid identification and quantitation by electrospray ionization mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Qualitative analysis and quantitative assessment of changes in neutral glycerol lipid molecular species within cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

The Edinburgh human metabolic network reconstruction and its functional analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Moving toward a system genetics view of disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

The Pathway Tools cellular overview diagram and Omics Viewer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Nitrated fatty acids: Endogenous anti-inflammatory signaling mediators

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

VANTED: a system for advanced data analysis and visualization in the context of biological networks

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Ser/Thr phosphorylation of IRS proteins: a molecular basis for insulin resistance

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Targeted lipidomics using electron capture atmospheric pressure chemical ionization mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

A method of comparing the areas under receiver operating characteristic curves derived from the same cases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Metabolic diversity of progressive kidney disease in 325 patients with type 1 diabetes (the FinnDiane Study).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Network enrichment analysis in complex experiments

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Analysis of gene sets based on the underlying regulatory network

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Mathematical formulae for the prediction of the residual beta cell function during the first two years of disease in children and adolescents with insulin-dependent diabetes mellitus

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

GC/TOFMS analysis of metabolites in serum and urine reveals metabolic perturbation of TCA cycle in db/db mice involved in diabetic nephropathy.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Global metabolic profiling of animal and human tissues via UPLC-MS.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

C. elegans metallothioneins: response to and defence against ROS toxicity.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Simultaneous determination of endogenous deoxynucleotides and phosphorylated nucleoside reverse transcriptase inhibitors in peripheral blood mononuclear cells using ion-pair liquid chromatography coupled to mass spectrometry

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Aging, diabetes, and renal failure catalyze the oxidation of lysyl residues to 2-aminoadipic acid in human skin collagen: evidence for metal-catalyzed oxidation mediated by alpha-dicarbonyls

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Enantiomeric separation of hydroxy and hydroperoxy eicosanoids by chiral column chromatography

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Determination of free amino compounds in betalainic fruits and vegetables by gas chromatography with flame ionization and mass spectrometric detection

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

LC/MS/MS method for quantitative determination of long-chain fatty acyl-CoAs.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Amino acid metabolism in the Zucker diabetic fatty rat: effects of insulin resistance and of type 2 diabetes

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Cardiovascular disease risk factors predict the development of type 2 diabetes: the insulin resistance atherosclerosis study

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Hepatic expression of malonyl-CoA decarboxylase reverses muscle, liver and whole-animal insulin resistance

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Plasma Amino Acid Levels and Insulin Secretion in Obesity

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4338589

Changes in ATP, phosphocreatine, and 16 metabolites in muscle stimulated for up to 96 hours

27 November 2018

1 reference

12 December 2020

Tandem mass spectrometry: a novel approach for metabolic flux analysis

1 reference

12 December 2020

The genetics of plant metabolism

1 reference

12 December 2020

Amine metabolomics of hyperglycemic endothelial cells using capillary LC-MS with isobaric tagging

1 reference

12 December 2020

A GC/MS-based metabolomic approach for diagnosing citrin deficiency

1 reference

12 December 2020

Identifiers

DOI

10.2337/DB14-0509

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25713200%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

PubMed publication ID

25713200

2 references