nanoCAGE reveals 5' UTR features that define specific modes of translation of functionally related MTOR-sensitive mRNAs (Q35960087)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26984228%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

title

nanoCAGE reveals 5' UTR features that define specific modes of translation of functionally related MTOR-sensitive mRNAs (English)

1 reference

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11 March 2020

4

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11 March 2020

Marie Cargnello

5

1 reference

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11 March 2020

Arjuna Rajakumar

10

1 reference

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11 March 2020

Luc Furic

11

1 reference

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11 March 2020

Ola Larsson

16

1 reference

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11 March 2020

Ivan Topisirovic

17

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11 March 2020

1

Valentina Gandin

1 reference

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11 March 2020

2

Laia Masvidal

1 reference

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11 March 2020

author name string

Laura Hulea

3

1 reference

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11 March 2020

Shannon McLaughlan

6

1 reference

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11 March 2020

Yutian Cai

7

1 reference

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11 March 2020

Preetika Balanathan

8

1 reference

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11 March 2020

Masahiro Morita

9

1 reference

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11 March 2020

Michael Pollak

12

1 reference

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11 March 2020

John A Porco

13

1 reference

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11 March 2020

Julie St-Pierre

14

1 reference

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11 March 2020

Jerry Pelletier

15

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11 March 2020

publication date

16 March 2016

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11 March 2020

1 reference

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11 March 2020

volume

26

1 reference

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11 March 2020

issue

5

1 reference

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11 March 2020

page(s)

636-648

1 reference

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Re-analysis of genome wide data on mammalian microRNA-mediated suppression of gene expression

11 March 2020

cites work

1 reference

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2 October 2017

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mTOR: a pharmacologic target for autophagy regulation

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Targeting the eIF4F translation initiation complex: a critical nexus for cancer development

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mTOR coordinates protein synthesis, mitochondrial activity and proliferation

2 October 2017

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2 October 2017

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Translatome profiling: methods for genome-scale analysis of mRNA translation

2 October 2017

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DBTSS as an integrative platform for transcriptome, epigenome and genome sequence variation data

2 October 2017

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Transcriptome-wide characterization of the eIF4A signature highlights plasticity in translation regulation

2 October 2017

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The race to decipher the top secrets of TOP mRNAs

2 October 2017

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RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer

2 October 2017

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2 October 2017

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2 October 2017

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Translational control of immune responses: from transcripts to translatomes

2 October 2017

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System wide analyses have underestimated protein abundances and the importance of transcription in mammals

2 October 2017

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A promoter-level mammalian expression atlas

2 October 2017

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Oxygen sufficiency controls TOP mRNA translation via the TSC-Rheb-mTOR pathway in a 4E-BP-independent manner.

2 October 2017

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A proteomic chronology of gene expression through the cell cycle in human myeloid leukemia cells

2 October 2017

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Making new contacts: the mTOR network in metabolism and signalling crosstalk

2 October 2017

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Proteomic analysis of cap-dependent translation identifies LARP1 as a key regulator of 5'TOP mRNA translation

2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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2 October 2017

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Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

2 October 2017

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The translational landscape of mTOR signalling steers cancer initiation and metastasis

2 October 2017

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2 October 2017

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2 October 2017

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Unique translation initiation of mRNAs-containing TISU element

2 October 2017

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Global quantification of mammalian gene expression control

2 October 2017

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mRNA helicases: the tacticians of translational control

2 October 2017

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NanoCAGE: a high-resolution technique to discover and interrogate cell transcriptomes

2 October 2017

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Global signatures of protein and mRNA expression levels

2 October 2017

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2 October 2017

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Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling

2 October 2017

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An ATP-competitive mammalian target of rapamycin inhibitor reveals rapamycin-resistant functions of mTORC1

2 October 2017

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Parkin is recruited selectively to impaired mitochondria and promotes their autophagy

2 October 2017

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Therapeutic suppression of translation initiation modulates chemosensitivity in a mouse lymphoma model

2 October 2017

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Targeting the eukaryotic translation initiation factor 4E for cancer therapy

2 October 2017

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Fission and selective fusion govern mitochondrial segregation and elimination by autophagy

2 October 2017

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Control of mammalian translation by mRNA structure near caps

2 October 2017

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Stimulation of mammalian translation initiation factor eIF4A activity by a small molecule inhibitor of eukaryotic translation

2 October 2017

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Phosphorylation of eucaryotic translation initiation factor 4B Ser422 is modulated by S6 kinases

2 October 2017

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Construction of a Full-Length Enriched and a 5'-End Enriched cDNA Library Using the Oligo-Capping Method

2 October 2017

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Hierarchical phosphorylation of the translation inhibitor 4E-BP1

2 October 2017

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The requirement for eukaryotic initiation factor 4A (elF4A) in translation is in direct proportion to the degree of mRNA 5' secondary structure.

2 October 2017

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Regulation of 4E-BP1 phosphorylation: a novel two-step mechanism

2 October 2017

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Correlation between protein and mRNA abundance in yeast

2 October 2017

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Measurement of mitochondrial membrane potential using fluorescent rhodamine derivatives

2 October 2017

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RAFT1 phosphorylation of the translational regulators p70 S6 kinase and 4E-BP1

2 October 2017

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Regulation of eIF-4E BP1 phosphorylation by mTOR.

2 October 2017

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4E-BP1 phosphorylation is mediated by the FRAP-p70s6k pathway and is independent of mitogen-activated protein kinase

2 October 2017

1 reference

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Dominant negative mutants of mammalian translation initiation factor eIF-4A define a critical role for eIF-4F in cap-dependent and cap-independent initiation of translation

2 October 2017

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Insulin-dependent stimulation of protein synthesis by phosphorylation of a regulator of 5'-cap function

2 October 2017

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Overexpression of initiation factor eIF-4E does not relieve the translational repression of ribosomal protein mRNAs in quiescent cells

2 October 2017

1 reference

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Oligopyrimidine tract at the 5' end of mammalian ribosomal protein mRNAs is required for their translational control

2 October 2017

1 reference

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mRNAs containing extensive secondary structure in their 5' non-coding region translate efficiently in cells overexpressing initiation factor eIF-4E

2 October 2017

1 reference

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Insertion mutagenesis to increase secondary structure within the 5' noncoding region of a eukaryotic mRNA reduces translational efficiency.

2 October 2017

1 reference

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Polysome fractionation and analysis of mammalian translatomes on a genome-wide scale

27 July 2018

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Ribosome profiling: new views of translation, from single codons to genome scale

24 September 2018

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mTORC1 controls mitochondrial activity and biogenesis through 4E-BP-dependent translational regulation.

24 September 2018

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Functional characterization of IRESes by an inhibitor of the RNA helicase eIF4A.

24 September 2018

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The mitochondrial permeability transition initiates autophagy in rat hepatocytes.

24 September 2018

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Translational control of the innate immune response through IRF-7

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4864462

Model for the regulation of mRNA translation applied to haemoglobin synthesis

14 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26984228

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.197566.115

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26984228%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26984228%20AND%20SRC:MED&resulttype=core&format=json

11 March 2020

PubMed publication ID

26984228

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26984228%20AND%20SRC:MED&resulttype=core&format=json