Translation initiation is driven by different mechanisms on the HIV-1 and HIV-2 genomic RNAs. (Q38053243)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079111%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

title

Translation initiation is driven by different mechanisms on the HIV-1 and HIV-2 genomic RNAs (English)

1 reference

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15 February 2020

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079111%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Ricardo Soto Rifo

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079111%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Marcelo López-Lastra

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079111%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

Théophile Ohlmann

4

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15 February 2020

author name string

Sylvain de Breyne

1

1 reference

27 August 2017

Ricardo Soto-Rifo

2

1 reference

27 August 2017

Marcelo López-Lastra

3

1 reference

27 August 2017

Théophile Ohlmann

4

1 reference

27 August 2017

16 October 2012

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079111%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079111%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

volume

171

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15 February 2020

issue

2

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15 February 2020

page(s)

366-381

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A novel long distance base-pairing interaction in human immunodeficiency virus type 1 RNA occludes the Gag start codon

15 February 2020

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Cap-dependent and hepatitis C virus internal ribosome entry site-mediated translation are modulated by phosphorylation of eIF2alpha under oxidative stress

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Cleavage of eukaryotic translation initiation factor 4GII correlates with translation inhibition during apoptosis

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Eukaryotic translation initiation factor 4G is targeted for proteolytic cleavage by caspase 3 during inhibition of translation in apoptotic cells

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The 5' untranslated region and Gag product of Idefix, a long terminal repeat-retrotransposon from Drosophila melanogaster, act together to initiate a switch between translated and untranslated states of the genomic mRNA.

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7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

The SIVmac239 Pr55Gag isoform, SIV p43, suppresses proteolytic cleavage of Pr55Gag

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

An internal ribosome entry site promotes translation of a novel SIV Pr55(Gag) isoform

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

HIV-1 protease processes procaspase 8 to cause mitochondrial release of cytochrome c, caspase cleavage and nuclear fragmentation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

The 5'-terminal structures of poliovirion RNA and poliovirus mRNA differ only in the genome-linked protein VPg

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

An internal ribosome entry segment promotes translation of the simian immunodeficiency virus genomic RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

In vitro cleavage of eIF4GI but not eIF4GII by HIV-1 protease and its effects on translation in the rabbit reticulocyte lysate system

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

The C-terminal domain of eukaryotic protein synthesis initiation factor (eIF) 4G is sufficient to support cap-independent translation in the absence of eIF4E.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

A riboswitch regulates RNA dimerization and packaging in human immunodeficiency virus type 1 virions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Dimerization of retroviral RNA genomes: an inseparable pair.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Cleavage of eIF4G by HIV-1 protease: effects on translation.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Eukaryotic ribosomes require initiation factors 1 and 1A to locate initiation codons

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

The roles of individual eukaryotic translation initiation factors in ribosomal scanning and initiation codon selection

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

The joining of ribosomal subunits in eukaryotes requires eIF5B.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initiation of hepatitis C and classical swine fever virus RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Functional dissection of eukaryotic initiation factor 4F: the 4A subunit and the central domain of the 4G subunit are sufficient to mediate internal entry of 43S preinitiation complexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Mechanistic role of structurally dynamic regions in Dicistroviridae IGR IRESs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Structural basis for ribosome recruitment and manipulation by a viral IRES RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Regulation of protein kinase B and 4E-BP1 by oxidative stress in cardiac myocytes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Functional and structural similarities between the internal ribosome entry sites of hepatitis C virus and porcine teschovirus, a picornavirus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Recycling of eukaryotic posttermination ribosomal complexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Specific functional interactions of nucleotides at key -3 and +4 positions flanking the initiation codon with components of the mammalian 48S translation initiation complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Translation initiation on mammalian mRNAs with structured 5'UTRs requires DExH-box protein DHX29.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Mechanism of ribosome shunting in Rice tungro bacilliform pararetrovirus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Conducting the initiation of protein synthesis: the role of eIF4G.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Characterization of a novel RNA-binding region of eIF4GI critical for ribosomal scanning

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

eIF2 and the control of cell physiology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

The in vitro loose dimer structure and rearrangements of the HIV-2 leader RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Suppression of cap-dependent translation in mitosis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

A cell cycle-dependent internal ribosome entry site

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Specific domains in yeast translation initiation factor eIF4G strongly bias RNA unwinding activity of the eIF4F complex toward duplexes with 5'-overhangs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

In vitro expression of the HIV-2 genomic RNA is controlled by three distinct internal ribosome entry segments that are regulated by the HIV protease and the Gag polyprotein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Lentiviral RNAs can use different mechanisms for translation initiation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Distinct 5' UTRs regulate XIAP expression under normal growth conditions and during cellular stress

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

The Elav-like protein HuR exerts translational control of viral internal ribosome entry sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Processing of the precursor of NF-kappa B by the HIV-1 protease during acute infection

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Viral strategies to subvert the mammalian translation machinery

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Differential utilization of upstream AUGs in the beta-secretase mRNA suggests that a shunting mechanism regulates translation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Modulation of the helicase activity of eIF4A by eIF4B, eIF4H, and eIF4F.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Characterization of two distinct RNA domains that regulate translation of the Drosophila gypsy retroelement.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Structural changes of eIF4E upon binding to the mRNA 5' monomethylguanosine and trimethylguanosine Cap.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Viral strategies of translation initiation: ribosomal shunt and reinitiation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Molecular dissection of the prototype foamy virus (PFV) RNA 5'-UTR identifies essential elements of a ribosomal shunt

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Human DEAD-box protein 3 has multiple functions in gene regulation and cell cycle control and is a prime target for viral manipulation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

IRES-mediated pathways to polysomes: nuclear versus cytoplasmic routes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Thriving under stress: selective translation of HIV-1 structural protein mRNA during Vpr-mediated impairment of eIF4E translation activity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Capping of eucaryotic mRNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Cap- and IRES-independent scanning mechanism of translation initiation as an alternative to the concept of cellular IRESs.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Translation of cIAP2 mRNA is mediated exclusively by a stress-modulated ribosome shunt

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Non-viral cellular substrates for human immunodeficiency virus type 1 protease

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

RIG-I-mediated antiviral signaling is inhibited in HIV-1 infection by a protease-mediated sequestration of RIG-I.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Regulation of translation initiation in eukaryotes: mechanisms and biological targets

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Different effects of the TAR structure on HIV-1 and HIV-2 genomic RNA translation.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

DEAD-box protein DDX3 associates with eIF4F to promote translation of selected mRNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Chapter 1. Regulation of HIV-1 alternative RNA splicing and its role in virus replication

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Analysis of the c-myc IRES; a potential role for cell-type specific trans-acting factors and the nuclear compartment

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Cellular internal ribosome entry segments: structures, trans-acting factors and regulation of gene expression

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

A 5'UTR-spliced mRNA isoform is specialized for enhanced HIV-2 gag translation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Viral SELEX reveals individual and cooperative roles of the C-box and G-box in HIV-2 replication

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Cellular proteins and HIV-1 Rev function

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Cell cycle arrest in G2 induces human immunodeficiency virus type 1 transcriptional activation through histone acetylation and recruitment of CBP, NF-kappaB, and c-Jun to the long terminal repeat promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Ribosome-messenger recognition in the absence of the Shine-Dalgarno interactions.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Alternative translation initiation of the Moloney murine leukemia virus mRNA controlled by internal ribosome entry involving the p57/PTB splicing factor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Functional and structural analysis of the internal ribosome entry site present in the mRNA of natural variants of the HIV-1

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Demonstrating internal ribosome entry sites in eukaryotic mRNAs using stringent RNA test procedures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

HIV-1 protease cleaves eukaryotic initiation factor 4G and inhibits cap-dependent translation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Pyrimidine tract binding protein and La autoantigen interact differently with the 5' untranslated regions of lentiviruses and oncoretrovirus mRNAs.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

A new type of IRES within gag coding region recruits three initiation complexes on HIV-2 genomic RNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Coping with stress: eIF2 kinases and translational control

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

14-3-3sigma controls mitotic translation to facilitate cytokinesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Structural features of the Seneca Valley virus internal ribosome entry site (IRES) element: a picornavirus with a pestivirus-like IRES

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Initiation of protein synthesis from the A site of the ribosome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Specificity of recognition of mRNA 5' cap by human nuclear cap-binding complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Trimethylguanosine capping selectively promotes expression of Rev-dependent HIV-1 RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Requirement of DDX3 DEAD box RNA helicase for HIV-1 Rev-RRE export function

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Vpr-host interactions during HIV-1 viral life cycle

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

Rapamycin stimulates viral protein synthesis and augments the shutoff of host protein synthesis upon picornavirus infection

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

7 January 2021

An internal ribosomal entry mechanism promotes translation of murine leukemia virus gag polyprotein precursors.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

7 January 2021

In vitro characterization of an internal ribosomal entry site (IRES) present within the 5' nontranslated region of hepatitis A virus RNA: comparison with the IRES of encephalomyocarditis virus

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

7 January 2021

In vitro translation of poliovirus RNA: utilization of internal initiation sites in reticulocyte lysate

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

7 January 2021

A segment of the 5' nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

7 January 2021

A single nucleotide substitution in the internal ribosome entry site of foot-and-mouth disease virus leads to enhanced cap-independent translation in vivo

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

7 January 2021

Location of cis-acting signals important for RNA encapsidation in the leader sequence of human immunodeficiency virus type 2.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

7 January 2021

The human immunodeficiency virus type 1 5' packaging signal structure affects translation but does not function as an internal ribosome entry site structure

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.10.006

7 January 2021

10.1016/J.VIRUSRES.2012.10.006

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23079111%20AND%20SRC:MED&resulttype=core&format=json

release_mjzdgyokjnccxmxfy7lsp7geg4

15 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/mjzdgyokjnccxmxfy7lsp7geg4

24 November 2022

mapped directly with Wikidata item

1 reference