RNA-based recognition and targeting: sowing the seeds of specificity (Q39135511)

9 September 2017

title

RNA-based recognition and targeting: sowing the seeds of specificity (English)

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9 September 2017

3

Jennifer A Doudna

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9 September 2017

Stanislaw A Gorski

1

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9 September 2017

Jörg Vogel

series ordinal

2

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9 September 2017

publication date

15 February 2017

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Nature Reviews Molecular Cell Biology

9 September 2017

published in

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9 September 2017

volume

18

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9 September 2017

issue

4

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9 September 2017

page(s)

215-228

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The noncoding RNA revolution-trashing old rules to forge new ones

9 September 2017

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Small RNA sorting: matchmaking for Argonautes.

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Enhancement of the Seed-Target Recognition Step in RNA Silencing by a PIWI/MID Domain Protein

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Human Argonaute 2 Has Diverse Reaction Pathways on Target RNAs.

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miRNA-target chimeras reveal miRNA 3'-end pairing as a major determinant of Argonaute target specificity

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High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

31 March 2020

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Processing-independent CRISPR RNAs limit natural transformation in Neisseria meningitidis

31 March 2020

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A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

31 March 2020

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Structures of a CRISPR-Cas9 R-loop complex primed for DNA cleavage

31 March 2020

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Crystal Structure of Staphylococcus aureus Cas9

31 March 2020

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Regulation by small RNAs in bacteria: expanding frontiers

31 March 2020

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Bacterial small RNA regulators: versatile roles and rapidly evolving variations

31 March 2020

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Small RNAs in bacteria and archaea: who they are, what they do, and how they do it.

31 March 2020

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Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

31 March 2020

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Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli

31 March 2020

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Evolutionary patterns of Escherichia coli small RNAs and their regulatory interactions

31 March 2020

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An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium

31 March 2020

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Regulatory small RNAs from the 3' regions of bacterial mRNAs

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Hfq and its constellation of RNA

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Target activation by regulatory RNAs in bacteria

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Messenger RNA degradation in bacterial cells

31 March 2020

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Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis

31 March 2020

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Regulatory RNAs and target mRNA decay in prokaryotes.

31 March 2020

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A small RNA activates CFA synthase by isoform-specific mRNA stabilization

31 March 2020

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Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by Hfq

31 March 2020

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Evidence for an autonomous 5' target recognition domain in an Hfq-associated small RNA

31 March 2020

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Recognition of heptameric seed sequence underlies multi-target regulation by RybB small RNA in Salmonella enterica

31 March 2020

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Comprehensive analysis reveals how single nucleotides contribute to noncoding RNA function in bacterial quorum sensing

31 March 2020

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Global Mapping of Small RNA-Target Interactions in Bacteria

31 March 2020

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Involvement of a novel transcriptional activator and small RNA in post-transcriptional regulation of the glucose phosphoenolpyruvate phosphotransferase system

31 March 2020

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The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair

31 March 2020

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Small RNA binding to 5' mRNA coding region inhibits translational initiation

31 March 2020

1 reference

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Post-transcriptional control of the Escherichia coli PhoQ-PhoP two-component system by multiple sRNAs involves a novel pairing region of GcvB

31 March 2020

1 reference

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Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA.

31 March 2020

1 reference

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The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli

31 March 2020

1 reference

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Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA

31 March 2020

1 reference

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In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways

31 March 2020

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A 3' UTR-Derived Small RNA Provides the Regulatory Noncoding Arm of the Inner Membrane Stress Response

31 March 2020

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Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition

31 March 2020

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Structural mechanism of Staphylococcus aureus Hfq binding to an RNA A-tract

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRM.2016.174

Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRM.2016.174

Structure of Escherichia coli Hfq bound to polyriboadenylate RNA

31 March 2020

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Alternative Hfq-sRNA interaction modes dictate alternative mRNA recognition

31 March 2020

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Structural model of an mRNA in complex with the bacterial chaperone Hfq.

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Conserved arginines on the rim of Hfq catalyze base pair formation and exchange

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Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo

31 March 2020

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Identification of bacteriophage-encoded anti-sRNAs in pathogenic Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRM.2016.174

Small RNA-based feedforward loop with AND-gate logic regulates extrachromosomal DNA transfer in Salmonella

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRM.2016.174

RNA biochemistry. Determination of in vivo target search kinetics of regulatory noncoding RNA.

31 March 2020

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Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRM.2016.174

Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRM.2016.174

Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRM.2016.174

Structures of the RNA-guided surveillance complex from a bacterial immune system

31 March 2020

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RNAs actively cycle on the Sm-like protein Hfq.

31 March 2020

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Antisense RNA regulation in prokaryotes: rapid RNA/RNA interaction facilitated by a general U-turn loop structure

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RNA loop-loop interactions as dynamic functional motifs.

31 March 2020

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A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation

31 March 2020

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External Guide Sequences for an RNA Enzyme

31 March 2020

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Silencing of natural transformation by an RNA chaperone and a multitarget small RNA.

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Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

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31 March 2020

Identifiers

DOI

10.1038/NRM.2016.174

1 reference

9 September 2017

1 reference